BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB002A07LP1|AL424887
(591 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1619 561 e-160
>3x_Contig1619
Length = 7770
Score = 561 bits (269), Expect = e-160
Identities = 332/367 (90%)
Strand = Plus / Plus
Query: 225 tcatccccgagnatcncamggggatgagccgcggggttaatatttatcccacataattav 284
||||||||||| ||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct: 6137 tcatccccgagaatctcagggggatgagccgcggggttaatatttatcccacataattaa 6196
Query: 285 gnataattatmtatgtattmtwaattatamwnmhttatatatantaaaggmagcgagact 344
| |||||||| |||||||| ||||||| ||||||||| || ||| |||||||||
Sbjct: 6197 gtataattatatatgtatttataattataataatttatatatattataggtagcgagact 6256
Query: 345 tnaactcgcattcaatgtttggaagacattcagtttaccmattaacttmwacctatatta 404
| ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||
Sbjct: 6257 tgaactcgcattcaatgtttggaagacattcagtttaccaattaacttatacctatatta 6316
Query: 405 tttttataatmmaatacactctctatgactcgcacatagaatcttaatattagaagtatt 464
|||||||||| ||||| |||||||||||||| |||||||||||||||||||||||||||
Sbjct: 6317 tttttataatataatactctctctatgactcgaacatagaatcttaatattagaagtatt 6376
Query: 465 aggctttaaccattaagctaagagagctaataattatattgakcccscsagtattatatt 524
|||||||||||||||||||||||||||||||||||||||||| ||| | |||||||||||
Sbjct: 6377 aggctttaaccattaagctaagagagctaataattatattgatcccgcgagtattatatt 6436
Query: 525 tggrkragactcgtccccccaaatgaggcatataggatgatgccacatttkgggggggaa 584
| | |||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 6437 tatataatactcgtccccccaaatgaggcatataggatgatgccacatttggggggggaa 6496
Query: 585 gggttaa 591
|||||||
Sbjct: 6497 gggttaa 6503
Score = 242 bits (116), Expect = 7e-64
Identities = 116/116 (100%)
Strand = Plus / Plus
Query: 1 atccattatataattttactgtgtatccttaaaaaaaaattaagtacaggattatcaaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5916 atccattatataattttactgtgtatccttaaaaaaaaattaagtacaggattatcaaaa 5975
Query: 61 ttaatataacccgccaatttatataataaattggcgggttatatatctatatatat 116
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5976 ttaatataacccgccaatttatataataaattggcgggttatatatctatatatat 6031
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.44 0.721 1.36
Gapped
Lambda K H
1.44 0.721 1.36
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3360
Number of Sequences: 1807
Number of extensions: 3360
Number of successful extensions: 115
Number of sequences better than 1.0e-20: 1
length of query: 591
length of database: 10,358,551
effective HSP length: 16
effective length of query: 575
effective length of database: 10,329,639
effective search space: 5939542425
effective search space used: 5939542425
T: 0
A: 40
X1: 5 (10.4 bits)
X2: 14 (29.2 bits)
S1: 11 (23.4 bits)
S2: 48 (100.5 bits)